November 2023 - December 2023

United Arab Emirates (UAE) 2023

Mission Goal

The mission leveraged eDNA for improved fisheries assessment and expanded seafloor, habitat, and biodiversity surveys across UAE waters, aiding in MPA establishment and sustainable fisheries management.

How we made an impact
  • Baseline biodiversity surveys, eDNA sampling, and seafloor mapping revealed ecologically significant habitats that provide the foundation for future Marine Protected Areas (MPAs) and improved fisheries management.

  • High-resolution mapping and geological studies uncovered unique seafloor features, paleoclimate records, and earthquake-related fault activity, generating insights for ecosystem protection and community safety.

  • The mission invited UAE institutions in joint research, producing data for upcoming scientific publications and equipping regional scientists with tools and expertise to sustain long-term ocean research and management.

Scientific Accomplishments

Exploring UAE Waters to Unlock Hidden Ecosystems

The waters of the UAE are some of the hottest in the world. Yet they host a rich mosaic of ecosystems, from shallow coral reefs and mangroves to mesophotic reefs and deep-sea slopes shaped by the powerful Hormuz Outflow, a dense, saline water mass flowing from the Arabian Gulf out the Strait of Hormuz. Despite their ecological importance and proximity to one of the world’s busiest shipping corridors, the Strait of Hormuz, these waters remained largely unexplored at depth. Off the coasts of Abu Dhabi and Fujairah, in partnership with UAE researchers and collaborators, OceanX carried out the first large-scale, multidisciplinary survey of the region, combining cutting-edge tools like eDNA analysis, high-resolution seafloor mapping, and submersible dives to establish a scientific baseline of biodiversity and oceanographic processes. 

The team documented life on all scales in UAE waters. We studied megafauna via shipboard, aerial, and acoustic surveys, revealing critical aggregation areas for whales, dolphins, and sharks. Our exploration of these animals included the first-ever sighting of a Byrde’s whale from a research vessel and the first ever sighting of a Bramble shark in UAE waters. Plankton and larval dispersal studies mapped recruitment pathways for key fisheries species, while microbial community assessments shed light on nutrient cycling and ecosystem health. eDNA sampling, paired with physical specimen collection and ROV transects, provided unprecedented biodiversity inventories across reef, pelagic, and deep-sea habitats. These findings not only expanded scientific knowledge but also created essential baselines to inform the design of marine protected areas and sustainable fisheries management approaches. 

Hormuz Outflow

A dense, salty water mass that exits the Arabian Gulf through the Strait of Hormuz and sinks into the Arabian Sea. Studying this outflow allows scientists to better understand how it influences productivity, biodiversity, and larval dispersal in UAE waters, critical insights for managing fisheries and protecting ecosystems.

Paleoclimate Sediment Records

Sediment cores used to reconstruct the UAE’s paleoclimate, or the climate of past geological periods, reveal historical patterns of temperature, nutrient deposits, and environmental change. Understanding these long-term climate trends helps scientists predict how current and future climate change may affect marine ecosystems and support informed conservation and fisheries management.

Microscopic to Megafauna Surveys

Research used an integrated approach combining eDNA, water sampling, ROV imaging, and aerial and ship-based observations to capture biodiversity across all scales. Mapping marine life from microscopic organisms to large whales is essential for understanding ecosystem connectivity, nutrient and energy flow, and resilience, providing a complete baseline to inform conservation, fisheries management, and MPA planning.

High-resolution multibeam mapping covered 1,257 square kilometers of unexplored seafloor, identifying unique geomorphological features, mesophotic coral reef habitats, and active seismic faults. This mapping provides vital knowledge for protecting livelihoods and coastal infrastructure in the UAE, highlighting areas that support fisheries, coral growth, and safe marine development. Sediment coring and paleoclimate studies revealed how past oceanographic shifts have shaped productivity and ecosystem resilience, offering vital long-term context for managing future change. These geological findings also have societal relevance, helping to improve earthquake risk preparedness and community safety in the region. 

These findings provide critical insight into the biodiversity, behavior, and ecological connectivity of UAE marine ecosystems. The OceanX UAE 2023 mission has resulted in multiple manuscripts in preparation and highlights the urgent need for continued exploration, conservation planning, and monitoring to protect these understudied waters. The scientific research resulting from this mission has the potential to inform sustainable management of commercially important fish in the UAE such as grouper, bream, and trevally upon which local fishing communities in Abu Dhabi, Fujairah, and the Northern Emirates rely for income, food security and ecological tourism.  

Mapping1,257 Sq. Km

Of seafloor mapped in the UAE

Surveying12 ROV Dives

Conducted for sediment cores, water samples, and habitat spot checks

Analyzing32 CTD Casts

Conducted for nutrient analysis and water sampling

Sampling86 Specimens

Of mesophotic corals including hard corals, soft corals, and black corals

Highlighting Projects in the UAE

Surveying Marine Megafauna

Using ship-based observations, aerial transects, hydrophones, and pioneering eDNA sampling, researchers documented whales, dolphins, and sharks across UAE waters. The team recorded 12 sightings during the first phase, including 11 bottlenose dolphin sightings and 1 Bryde’s whale, and completed whole genome sequencing for 3 cetacean species with 4 additional samples sequenced fully, establishing baseline genetic references. This project achieved the first eDNA-based assessment of offshore cetaceans in the region, offering critical data to inform conservation strategies and potential MPAs.

Mapping and Sampling Mesophotic Reefs

OceanX submersibles and ROVs were deployed to survey a newly discovered mesophotic reef off Fujairah, a 150 x 30 meter coral-encrusted rocky outcrop at a depth of 148 meters. Researchers collected 86 specimens of hard, soft, and black corals, along with 26 non-coral invertebrates, many representing new records for the UAE, Gulf of Oman, and Arabian Sea, and documented their habitat with photogrammetry. DNA extractions were completed for all coral species, and Scanning Electron Microscopy imaging is in progress. These results provide a detailed understanding of reef biodiversity, habitat structure, and ecosystem connectivity, supporting conservation planning and potential MPAs.

Assessing Fisheries with eDNA

Building on the 2015/2016 Fisheries Resources Assessment Survey (FRAS) baseline, this collaborative project combined eDNA sampling, tissue collection, and acoustic surveys across Abu Dhabi to assess fish biodiversity and stock distribution. During the 2023 UAE mission, we collected an additional 37 water samples from 19 FRAS stations to undergo Whole Genome Sequencing to create an updated picture of fisheries resources. This project provides essential data for sustainable fisheries management and future ecosystem monitoring.

Assessing Microbial Communities

Using rosette samplers, niskin bottles, and the McClane in-situ water pump system, researchers characterized microbial communities across multiple depths and habitats. The project established baseline data on microbial community composition and seasonal variations in the Gulf, providing insights into factors that influence resilience and distribution. These results contribute to understanding climate change impacts on microbial ecosystems and their foundational role in supporting fisheries and broader marine life.

Profiling the Depths of Plankton and Microbes

Conducted across epipelagic, mesopelagic, and bathypelagic zones, this project combined 12 CTD casts, 92 unique water samples, and 783 derivative samples for DNA, chemical, microbial, and cytometric analyses. Microbial biomass was captured for whole genome amplification and long-read sequencing, while filtered aliquots were used for elemental, hydrocarbon, and ion analyses. Opportunistic sampling in novel “pocked” seafloor sites and sediment push/gravity cores expanded the mapping of microbial and planktonic communities. These results provide a comprehensive picture of vertical biodiversity, biogeochemical gradients, and ecosystem connectivity in UAE waters.

Studying the Hormuz Outflow

Researchers examined the dense, salty water mass exiting the Arabian Gulf using CTD and ADCP instruments. CTD casts in offshore Fujairah waters revealed a spike in salinity and temperature between 130–220 meters depth, associated with the Hormuz Outflow, and helped refine models of how this outflow influences nutrient distribution, larval dispersal, and reef ecosystems. This project offers critical insights into circulation patterns that shape fisheries, biodiversity, and ecosystem connectivity across UAE waters.

Collaboration & Education

Building Regional Scientific Capacity Through Hands-On Collaboration

The UAE mission brought together over 15 local scientists from Khalifa University, NYU Abu Dhabi, Yas SeaWorld Research and Rescue Center, and Environment Agency Abu Dhabi (EAD)’s Abu Dahbi Environmental Research Network (ADERN) to collaborate with OceanX researchers across all aspects of the expedition. These scientists gained hands-on experience in cutting-edge marine research techniques, including eDNA sampling, whole genome sequencing, microbial community analysis, ROV and submersible operations, CTD profiling, and high-resolution bathymetric mapping. By working alongside OceanX experts, the team not only contributed to data collection across multiple habitats — from mesophotic reefs to the deep seafloor — but also built capacity to continue long-term monitoring, biodiversity assessments, and ecosystem management in UAE waters. 

Beyond scientific skill-building, this collaboration strengthened the capacity of regional researchers to integrate physical, genomic, and environmental data into actionable insights. The expedition also enabled cross-institutional knowledge sharing, allowing scientists from universities, government agencies, and research centers to refine methodologies, standardize protocols, and expand their understanding of marine ecosystems in one of the world’s warmest and least-studied waters. 

By hosting local scientists and fostering these collaborations, the UAE mission helped equip the region’s experts with the tools, data, and expertise needed to advance ocean-positive decision-making, inform sustainable fisheries management, and support the long-term conservation of critical marine habitats. The knowledge and skills developed during the mission are now poised to underpin future research, policy guidance, and educational initiatives across the UAE. 

Outcomes & Next Steps

Charting the Future of Marine Research and Conservation

The 2023 UAE mission provided the first comprehensive baseline of biodiversity, habitat structure, and environmental drivers across the region’s offshore waters, from mesophotic reefs to deep-sea sediments and cetacean populations. Key projects, including eDNA-based fisheries surveys, microbial and planktonic mapping, and high-resolution bathymetry, revealed new species records, ecosystem connectivity, and influences of features like the Hormuz Outflow. By collaborating with regional scientists from Khalifa University, NYU Abu Dhabi, Yas SeaWorld, and EAD’s ADERN network, the mission equipped local researchers with advanced tools and skills to continue long-term monitoring and conservation efforts, supporting sustainable fisheries, informing potential Marine Protected Areas, and translating discoveries into actionable science and policy. 

The bramble shark is a deep-dwelling species that's covered in thorns. It's rarely observed, and our close-up encounter marks the first time the species has ever been spotted in the waters of the United Arab Emirates.

Deep-Sea Bramble Shark Spotted in the UAE

In 2023, OceanX set out on a two-phased expedition to the United Arab Emirates (UAE) to better understand the region’s unique aquatic ecosystems which are home to some of the hottest waters in the world and stands as an example of the conditions that other regions may soon face due to the Earth’s changing climate. Starting on the coastline of Abu Dhabi, the OceanXplorer embarked on phase I on November 14, 2023, stopped in Dubai (pictured here) for COP28, and made its way to Fujairah.
Geophysics researchers at Khalifa University examine a sediment core, a key tool for uncovering the history of marine ecosystems, past climate patterns, nutrient cycles, and seafloor geology. On this mission, we collected sediment cores to reconstruct the UAE’s paleoclimate, analyze seasonal nutrient deposition, and study geological features of the seafloor.
Dr. John Burt, Professor of Biology at NYU Abu Dhabi, holds up a variety of mesophotic coral specimens collected by an OceanX ROV at a newly discovered reef off the coast of Fujairah in the Gulf of Oman. His team is working with the Fujairah Environment Authority in the UAE to establish a Marine Protected Area surrounding this reef ecosystem.

“Mesophotic reef ecosystems occupy around 80% of the area that’s habitable for corals globally, yet we know almost nothing about them. It is almost like an alien landscape down there. It's a very low-light environment with many life forms that are unknown to science.”

John Burt
Professor, Marine Biology
NYU Abu Dhabi

Dr. Ada Natoli and her team from Zayed University team up with scientists from Fujairah Marine Research Center aboard the OceanXplorer to study the whales and dolphins living far from shore. This is the first dedicated scientific survey of its kind in UAE waters.

Hidden Marine Life of the UAE: Tracking Rare Whales and Dolphins

Dr. Ada Natoli, molecular ecologist from the UAE Dolphin Project and Assistant Professor at Zayed University, prepares water samples for eDNA sequencing as a proof-of-concept study to determine if this genomic technology can effectively pick up cetacean DNA in the pelagic waters off the coast of Abu Dhabi. Her collaborative project constructed the first whole genome sequences from whale and dolphin tissue samples in the UAE.
Scientists collected a total of 26 non-coral invertebrate species, including shrimp like this one, crabs, mollusks, and other invertebrates from the newly discovered mesophotic reef during the UAE mission. These non-coral invertebrates help reveal the reef’s overall biodiversity and ecosystem complexity, providing insight into species interactions and habitat health beyond the corals themselves.
In partnership with G42 and their subsidiary Bayanat, OceanX scientists analyzed eDNA from 16 commercially important fish species and integrated the data into the AI-powered GIQ platform. GIQ combined genomic, environmental, and seafloor habitat information to create a comprehensive map of molecular diversity across UAE waters, enabling visualization of ecological patterns and supporting data-driven conservation and fisheries management.
Shady Amin from NYU Abu Dhabi led the microbial community assessments, studying seasonal variations in microbial composition in UAE waters. He collected water samples using rosette samplers and niskin bottles, analyzed microbial diversity, and examined factors influencing distribution and resilience, contributing to understanding how climate change affects microbial ecosystems in the region.
A deep dive into the research onboard

Tracking Biodiversity and Characterizing Habitats from Mesophotic Reefs to the Seafloor

Meet Our Collaborators


Our Partners

Local collaborating organizations and institutions


Environmental Agency of Abu Dhabi

The Environmental Agency of Abu Dhabi (EAD) is the UAE’s largest environmental regulator. EAD supports conservation efforts throughout the emirates while also advancing forward thinking and sustainable policymaking. EAD also manages the ADERN network, a community of researchers, universities, and partners working towards the common goal of studying the marine and coastal ecosystems in the UAE. On this mission, OceanX partnered with three researchers from ADERN to advance the understanding of life in the Arabian Gulf from the microbial and planktonic communities to the elusive cetaceans they support.

G42

G42 is a global technology group headquartered in Abu Dhabi with a mission to develop cutting-edge artificial intelligence solutions for societal betterment. They collaborate with industry leaders to create responsible and impactful digital transformation solutions spanning various sectors, with a focus on healthcare and space exploration.

Bayanat

Bayanat, a subsidiary of G42, specializes in advanced AI-powered geospatial intelligence services for sectors like Defense, Environment, Energy & Resources, Smart Cities, and Transportation. Their offerings included various geospatial products and services enhanced by AI, known as gIQ.

Fujairah Research Centre

The Fujairah Research Centre (FRC) supports the Emirate of Fujairah’s vision of a sustainable economy by driving applied research and innovation in marine, environmental, genetic, and wildlife fields, including work on reef restoration and biodiversity monitoring.

Khalifa University

Khalifa University is a globally-ranked, research-intensive institution in Abu Dhabi that brings together science and engineering expertise and recently inaugurated the region’s first advanced marine-studies lab for underwater robotics and habitat research.

NYU Abu Dhabi

NYU Abu Dhabi’s Marine Sciences Core Technology Platform provides researchers with tools and training to use the Arabian Gulf as a natural laboratory for studying how organisms adapt to extreme marine environments and inform regional conservation.

Yas SeaWorld Research and Rescue Center

Located on Yas Island, Abu Dhabi, this facility is the region’s first integrated marine research, rescue, rehabilitation, and education center, supporting conservation of Arabian Gulf species and habitats while training the next generation of marine scientists and wildlife professionals.

Our Team

Collaborating scientists on the UAE Mission


Ada Natoli

Molecular Biologist at the UAE Dolphin Project and Assistant Professor at Zayed University

Shady Amin

Associate Professor of Biology and Associate Program Head for Undergraduate Studies at NYU Abu Dhabi

Gerrit Nanninga

Marine Scientist at Yas SeaWorld Research and Rescue Center

John Burt

Professor of Biology at NYU Abu Dhabi

Francesco Paparella

Associate Professor of Mathematics; Global Network Associate Professor of Mathematics, Courant Institute of Mathematical Sciences at NYU Abu Dhabi

Aisha Al Suwaidi

Associate Professor in Earth Science at Khalifa University

Muhammad Ali

Professor and Chair of Earth Science at Khalifa University

Jorge Dias

Professor in Computer and Information Engineering at Khalifa University

Moamen Ali Mohammed

Postdoctoral Fellow in Earth Science at Khalifa University

Ahmed Abdelmaksoud Osman

Postdoctoral Fellow in Earth Science at Khalifa University